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The H3Africa Biospecimen and Data Catalogue

The H3Africa Data Catalogue enables international and African based researchers to search for H3Africa genomics data, physical Biospecimens, their associated metadata and enable researchers to select the relevant samples, populate an online application request form for access to the data from the H3Africa Data and Biospecimen Access Committee (DBAC).

Aim of the catalogue:

  1. Search and browse H3Africa data associated with samples and genomic data
  2. Select datasets or sample sets of interest
  3. Enable ontology-based searching – find results for nearest relevant term, autocomplete search box
  4. Generate online request form for these datasets and/or sample sets –from same or different projects

Follow this link to the Catalogue…

The 14th Meeting of the H3Africa Consortium

Meeting Overview

14th H3Africa Consortium Meeting 22nd – 27th September 2019, Accra, Ghana

  • Sunday – 22nd September 2019: Delegate Arrival & Registration.
  • Monday – 23rd September 2019: Fellows Workshop.
  • Tuesday – 24th September 2019: Principal Investigators & Fellows Presentations.
  • Wednesday – 25th September 2019: Principal Investigator’s Presentations and Working Group Sessions.
  • Thursday – 26th September 2019: H3Africa Working Group Day & Closing.
  • Friday – 27th September 2019: Tours & Departures.

For more information visit the H3Africa website


H3Africa Goal

Organized to enable African researchers to carry out large-scale studies on African populations, H3Africa will make use of state-of-the art genomic technologies, in combination with clinical and environmental analyses, with the aim of understanding the interaction of genes and the environment in health and disease. As part of this H3Africa will create new research capabilities in Africa by enhancing infrastructure and supporting pan- African collaborations, as well as collaborations with researchers in the United States and Europe when appropriate.

Introducing the Joint H3Africa Biorepository Website

Our New Internet Home!

H3Africa Biorepository program is very grateful to announce their brand new website www.biorepository.h3africa.org, our new global home. Whether you are a potential client, a researcher, a partner, etc, we hope you will find it easy to navigate and that you find the information you are looking for.

Please do let us know, however, if you have any problems or any questions about the website by contacting us.

Thank you again for visiting our new website.

Biospecimen Collection/Reception

The H3Africa Biorepository Program manages Biospecimen collections from the Human Heredity and Health in Africa (H3Africa) Consortium researchers as well as Biospecimen from other researchers. H3Africa studies are currently collecting DNA and other Biospecimens from participants in 22 African countries to assess genomic and environmental influences on communicable and non-communicable diseases. Whereas Biospecimen collection is done by H3Africa Consortium researchers, quality control and assurance for collection and processing is key to ensure long term future usability. The H3africa Biorepositories have designed tools to ensure quality along the Biospecimen chain from collection to storage and distribution, these include a web-based SPREC, SOPs and training to researchers to ensure quality Biospecimen.

Biospecimen processing

Biorepository operations are well-controlled process performed according to SOPs that minimize variation and prepare the Biospecimen for storage according to ISBER standards. The available and planned processing methods provide for long-term storage and do not preclude any methods for future analysis. Human cells may be stored for future detailed phenotypic, genomic or functional studies in living cells, to recover virions or viral nucleic acids and to enhance the availability of nucleic acids from the study subjects such as cultured lymphoblastoid cell lines that allows harvesting virtually unlimited amounts of DNA from single subjects. We provide services for PBMC separation and preparation for cryopreservation and more.

Biospecimen Storage

Current storage capacity in the dedicated facilities for the Biorepository is composed of room temperature, freezers -20°C and-80°C and liquid/vapor phase nitrogen tanks. The storage spaces and sample data are managed by STARLIMS and FreezerWorks Laboratory Information Management Systems at the different Biorepositories.

Quality Assurance and Quality Control

QA/QC processes available at the biorepositories include for Nucleic acids (DNA quantification, purity and integrity), this extends to other samples using tools such as SPREC, visual grading for serum and plasma.

Biospecimen Shipment/Distribution

Biospecimen location and rapid retrieval is facilitated by 2D barcoding and robust Information management systems (LIMS). This involves rapid and efficient retrieving Biospecimens from storage, packaging and shipment tracking to and from the H3Africa Consortium researcher and to requesting researchers in Africa and beyond. H3Africa biorepositories piloted Biospecimen shipping across Africa and beyond and have built capacity basing on these experience relating to cost, quality of services offered by couriers, logistical and ethical (permits and Material Transfer Agreements) and challenges in shipping across Africa.

Training in Biorepository Science and Management

H3Africa Biorepositories have designed training courses in Biorepository science and management and Biospecimen research trainings. Contact your regional biorepository for more information related to training services/schedule.

Sequencing and Bioinformatics

H3Africa Biorepositories have various Biospecimen within their custody, the Biorepositories have in-house capacity to add value by generating more genomic data through sequencing. Available sequencing technologies currently are Sanger and Next Generation Sequencing.

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